Method / assay (SCSA, TUNEL, SCD or Halosperm, Comet)
Which test the lab used to find DNA breaks.
- Reference
- No preferred method in guidelines
- If outside
- Results from different methods cannot be compared. If the method is not printed, ask.
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TESTS · SPERM DNA FRAGMENTATION
A sperm DNA fragmentation test looks for breaks in the genetic material inside the sperm head, which a routine semen analysis cannot see. It can help explain miscarriage or poor embryos, but it is one of the most oversold tests in fertility care, so we use it only when the answer changes a decision.
Sperm DNA fragmentation means breaks in the DNA packed inside the sperm head, and every man has some.
The question is whether there is an unusual amount. A sperm with damaged DNA can look normal, swim well and still fertilise an egg. That is why a routine semen analysis cannot find it, and why a man with a normal count can still have a high result.
He gives one semen sample, the same way as for a semen analysis, and the lab stains or treats the sperm to count how many carry DNA breaks.
The result is the DNA fragmentation index (DFI): the percentage of sperm showing damage. Several methods exist (SCSA, TUNEL, SCD or Halosperm, Comet). They measure related but different things, so each has its own threshold. The sperm tested are damaged by the test, so they are never the sperm used in treatment.
It is worth doing when a result would change the plan: after recurrent miscarriage, repeated cycles with poor embryos and no other cause, unexplained infertility after both partners are fully tested, or a borderline decision about treating a varicocele.
In each case something has already happened that needs explaining. At the start of a straightforward work-up, it rarely changes what we do next. Like any semen test, one raised result during or after an illness may not be his baseline, so it is repeated before anything irreversible is decided, usually about three months after a cause is corrected.
Guidelines are split. The AUA/ASRM guideline advises against sperm DNA testing in the first work-up of every couple, but supports it for the male partner after two or more pregnancy losses. The UK regulator (HFEA) cannot rate it as a treatment add-on because good-quality evidence is lacking. (AUA/ASRM guideline; HFEA)
A DFI result cannot tell you whether a particular cycle will work, and a high result does not mean he cannot father a child.
Men with high results conceive, naturally and with treatment. A normal result does not rule out other causes. It is also not a verdict on how he has lived: DNA breaks rise with ordinary things like age, heat, long drives and a spell of heavy drinking.
A sperm aneuploidy test (sperm FISH) counts sperm carrying the wrong number of chromosomes; it answers a different question from DNA fragmentation and is rarely useful.
It is not part of routine guideline testing for male infertility. It may be discussed in rare cases, such as repeated pregnancies with a chromosome error or a known chromosome problem in the man, usually alongside karyotyping and genetic counselling. Testing the embryos (PGT) looks at the embryo itself, and is discussed only in selected cases.
KaryotypingWe ask one question of every extra test: what will we do differently depending on the result?
If there is no clear answer, the test is not worth your money yet. The same rule made us stop recommending a test we had used for years.
We have used ERA in more than 750 patients in the past, but in our experience it did not improve live birth rates sufficiently for us to continue recommending it. (Dr Vani Sundarapandian, Medical Director)
Bring the DFI report with the method named, and his semen reports. We read them with you.

Which test the lab used to find DNA breaks.
The share of sperm in the sample with DNA breaks.
Sperm with immature, loosely packed DNA.
Days since last ejaculation, and how long the sample waited.
The share of sperm with an extra or missing chromosome, for the chromosomes tested.
Source of ranges: No guideline (AUA/ASRM, EAU, ESHRE, WHO) sets one normal DFI value. Thresholds belong to each method and each lab. A DFI number does not predict pregnancy.
IfBelow your lab's threshold
Sperm DNA is unlikely to be the explanation. We look harder at the other causes, including her side and the embryos.
What that meansIfRaised, with a reversible cause
Stop smoking, cut alcohol, lose excess weight, avoid heat, treat infection, shorten long abstinence. Repeat after about three months.
What that meansIfRaised, with a significant varicocele
Repair may lower DNA damage in carefully selected men. We discuss it with a urologist before deciding.
What that meansIfRaised on repeat, before IVF
ICSI with careful sperm selection, and in selected cases sperm taken from the testis. Discussed case by case, never as a routine upgrade.
What that meansDo any of these sound like you?
Every pregnancy and cycle so far, his semen reports, and the question you want answered.
A repeat semen analysis first. DFI only if the answer would change the plan.
What we would do with a normal and a raised result, agreed before the test.
Correct a cause and repeat, treat a varicocele, or ICSI with careful sperm selection.
There is no single normal DFI, because each test method has its own threshold set by the lab. Compare your result only with the threshold printed on your own report, for that method.
Yes. Count and DNA quality are separate measurements, so a man with a normal count can have a high DFI, and a man with a low count can have normal DNA.
No. The AUA/ASRM guideline advises against it in the routine first work-up; it is useful in selected cases, such as after two or more miscarriages.
Stopping smoking, cutting alcohol, losing excess weight, avoiding heat, treating infection and not abstaining for too long can all help, and a varicocele repair helps some men. Changes take about three months to show in a repeat test. Antioxidant supplements are widely sold, but the evidence that they lead to more babies is weak.
A sperm aneuploidy test (sperm FISH) checks the share of sperm with the wrong number of chromosomes. It is not a routine test and is discussed only in rare cases, usually with karyotyping and genetic counselling.
High sperm DNA fragmentation is linked with miscarriage in studies, which is why guidelines support testing the man after two or more losses. It is one possible cause among several, and her tests matter just as much.
The questions people don't ask with their partner sitting beside them, answered by Dr Vani Sundarapandian.
Have faith and be patient. A heartfelt thank you to Dr. Vani mam and each and every member of her team for the incredible support, care, and encouragement throughout this journey.
We will always be grateful to Dr. Vani mam and the entire nursing team for their exceptional care, support, and kindness throughout our journey.
Tell us what has happened so far and send his reports. Janvi, Jananam's companion for fertility treatment, replies straight away.
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Sex selection is prohibited in India under the PCPNDT Act, 1994 and the ART Act, 2021.
